Computational Biophysics and Bioinformatics

A. Chakravorty, Z. Jia, Y. Peng, N. Tajielyato, L. Wang, and E. Alexov
Gaussian-based smooth dielectric function: a surface-free approach for modeling macromolecular binding in solvents
Frontiers in molecular biosciences, 5, 25, 2018
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L. Wang, M. Zhang, and E. Alexov
DelPhiPKa web server: predicting p K a of proteins, RNAs and DNAs
Bioinformatics, 32(4), 614-615, 2016
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L. Li, L. Wang, and E. Alexov
On the energy components governing molecular recognition in the framework of continuum approaches
Frontiers in molecular biosciences, 2, 5, 2015
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L. Wang, L. Li, and E. Alexov
pKa predictions for proteins, RNA s, and DNA s with the Gaussian dielectric function using DelPhi pKa
Proteins: Structure, Function, and Bioinformatics, 83(12), 2186-2197, 2015
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M. Petukh, B. Wu, S. Stefl, N. Smith, D. Hyde-Volpe, L. Wang, and E. Alexov
Chronic beryllium disease: revealing the role of beryllium ion and small peptides binding to HLA-DP2
PLoS One, 9(11), e111604, 2014
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L. Wang, S. Witham, Z. Zhang, L. Li, M. E. Hodsdon, and E. Alexov
In silico investigation of pH-dependence of prolactin and human growth hormone binding to human prolactin receptor
Communications in computational physics, 13(1), 207, 2013
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L. Wang, Z. Zhang, W. Rocchia, and E. Alexov
Using DelPhi capabilities to mimic protein’s conformational reorganization with amino acid specific dielectric constants
Communications in computational physics, 13(1), 13, 2013
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Z. Zhang, J. Norris, V. Kalscheuer, T. Wood, L. Wang, C. Schwartz, E. Alexov, and H. V. Esch
A Y328C missense mutation in spermine synthase causes a mild form of Snyder--Robinson syndrome
Human molecular genetics, 22(18), 3789-3797, 2013
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M. Petukh, M. Zhenirovskyy, C. Li, L. Li, L. Wang, and E. Alexov
Predicting nonspecific ion binding using DelPhi
Biophysical journal, 102(12), 2885-2893, 2012
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Z. Zhang, L. Wang, Y. Gao, J. Zhang, M. Zhenirovskyy, and E. Alexov
Predicting folding free energy changes upon single point mutations
Bioinformatics, 28(5), 664-671, 2012
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Z. Zhang, M. A. Miteva, L. Wang, and E. Alexov
Analyzing effects of naturally occurring missense mutations
Computational and mathematical methods in medicine, 2012, 2012
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L. Li, C. Li, S. Sarkar, J. Zhang, S. Witham, Z. Zhang, L. Wang, N. Smith, et al.
DelPhi: a comprehensive suite for DelPhi software and associated resources
BMC biophysics, 5(1), 1-11, 2012
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S. Witham, K. Talley, L. Wang, Z. Zhang, S. Sarkar, D. Gao, W. Yang, and E. Alexov
Developing hybrid approaches to predict pKa values of ionizable groups
Proteins: Structure, Function, and Bioinformatics, 79(12), 3389-3399, 2011
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S. Teng, A. K. Srivastava, C. E. Schwartz, E. Alexov, and L. Wang
Structural assessment of the effects of Amino Acid Substitutions on protein stability and protein? protein interaction
International journal of computational biology and drug design, 3(4), 334-349, 2010
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Z. Zhang, S. Teng, L. Wang, C. E. Schwartz, and E. Alexov
Computational analysis of missense mutations causing Snyder-Robinson syndrome
Human mutation, 31(9), 1043-1049, 2010
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Computational Biophysics and Bioinformatics

Professor Emil Alexov Group

Journal Articles by L. Wang

Conference Papers