Computational Biophysics & Bioinformatics

1 ) Understanding the role of electrostatics in ion binding. [Download]

2 ) Lysozyme Motion [Watch/Download]

3 ) Lysine-specific demethylase 5C (KDM5C) Homology Model [Download]


  • Script to visualize the zphi output from DelPhi SURFPOT Module [Download]
  • Files for MMPBSA tutorial [Download]

There are two set of sDB and tDB

  • sDB - structural database
  • tDB - training database

1 ) sDB and tDB from Getov et. al. 2016 [PMID:27070572] sDB, tDB for SAAFEC

2 ) sDB and tDB from Petukh et. al. 2015 [PMID:26146996], 2016 [PMID:27077847] sDB, tDB for SAAMBE

3 ) Database for SAMPDI

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