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Computational Biophysics and Bioinformatics

Professor Emil Alexov Group

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2003


E. Alexov and B. Honig
Proton uptake/release induced by protein-inhibitor association. Application to pepstatin and plasmepsin, cathepsin D and endothiapepsin complexes.
BIOPHYSICAL JOURNAL, 2003
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E. Alexov
Role of the protein side-chain fluctuations on the strength of pair-wise electrostatic interactions: Comparing experimental with computed pKas
Proteins: Structure, Function, and Bioinformatics, 50(1), 94-103, 2003
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C. L. Tang, L. Xie, I. Y. Koh, S. Posy, E. Alexov, and B. Honig
On the role of structural information in remote homology detection and sequence alignment: new methods using hybrid sequence profiles
Journal of molecular biology, 334(5), 1043-1062, 2003
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D. Petrey, Z. Xiang, C. L. Tang, L. Xie, M. Gimpelev, T. Mitros, C. S. Soto, S. Goldsmith-Fischman, et al.
Using multiple structure alignments, fast model building, and energetic analysis in fold recognition and homology modeling
Proteins: Structure, Function, and Bioinformatics, 53(6), 430-435, 2003
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