Computational Biophysics and Bioinformatics

R. Aprigliano, S. Bradamante, B. Mihaljevic, W. Wang, S. L. F. Martin, D. L. Bordin, M. Bosshard, N. P. Montaldo, et al.
Increased p53 signaling impairs neural differentiation causing HUWE1-promoted intellectual disabilities
Cell Reports Medicine, 2, 100240, 2021
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M. Koirala, H. Shashikala, J. Jeffries, B. Wu, S. K. Loftus, J. H. Zippin, and E. Alexov
Computational Investigation of the pH Dependence of Stability of Melanosome Proteins: Implication for Melanosome formation and Disease
International journal of molecular sciences, 22(15), 8273, 2021
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E. Alexov
Special Issue on Computational Chemistry Methods to Predict pKa’s of Ionizable Groups in Proteins, RNAs, DNAs and Small Molecules
Journal of Computational Biophysics and Chemistry, 20(2), 109-110, 2021
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G. Li, S. Panday, Y. Peng, and E. Alexov
SAMPDI-3D: predicting the effects of protein and DNA mutations on protein-DNA interactions.
Bioinformatics (Oxford, England), 2021
RIS, BibTex

B. Wu, W. Hand, and E. Alexov
Opioid Addiction and Opioid Receptor Dimerization: Structural Modeling of the OPRD1 and OPRM1 Heterodimer and Its Signaling Pathways.
International journal of molecular sciences, 22(19), 2021
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S. Wang, E. Alexov, and S. Zhao
On regularization of charge singularities in solving the Poisson-Boltzmann equation with a smooth solute-solvent boundary [J]
Mathematical Biosciences and Engineering, 18(2), 1370-1405, 2021
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G. Li, S. K. Panday, and E. Alexov
SAAFEC-SEQ: A Sequence-Based Method for Predicting the Effect of Single Point Mutations on Protein Thermodynamic Stability
International Journal of Molecular Sciences, 22(2), 606, 2021
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H. Shashikala, A. Chakravorty, S. K. Panday, and E. Alexov
BION-2: Predicting Positions of Non-Specifically Bound Ions on Protein Surface by a Gaussian-Based Treatment of Electrostatics
International Journal of Molecular Sciences, 22(1), 272, 2021
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B. Wu, W. Hand, and E. Alexov
Opioid addiction and opioid receptor dimerization: structural modeling of the OPRD1 and OPRM1 heterodimer and its signaling pathways
International journal of molecular sciences, 22(19), 10290, 2021
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G. Li, S. Panday, Y. Peng, and E. Alexov
SAMPDI-3D: predicting the effects of protein and DNA mutations on protein–DNA interactions
Bioinformatics, 37(21), 3760-3765, 2021
RIS, BibTex

E. Alexov
Towards More Biology-Oriented Papers: Name Change of the Journal of Theoretical and Computational Chemistry to Journal of Computational Biophysics and Chemistry
Journal of Computational Biophysics and Chemistry, 20(1), 1, 2021
DOI, RIS, BibTex

Computational Biophysics and Bioinformatics

Professor Emil Alexov Group

2021