Computational Biophysics and Bioinformatics

I. Shapovalov, P. Rimal, P. Poudel, V. Lewtas, M. Bell, S. K. Panday, B. J. Laight, D. Harper, et al.
Quantification and structure-function analysis of calpain-1 and calpain-2 protease subunit interactions
Journal of Biological Chemistry, 110243, 2025
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P. Rimal, S. Paul, S. Panday, and E. Alexov
Further Development of SAMPDI-3D: A Machine Learning Method for Predicting Binding Free Energy Changes Caused by Mutations in Either Protein or DNA
Genes, 16(1), 101, 2025
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P. Rimal, S. K. Panday, W. Xu, Y. Peng, and E. Alexov
SAAMBE-MEM: a sequence-based method for predicting binding free energy change upon mutation in membrane protein–protein complexes
Bioinformatics, 40(9), 2024
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P. Pandey, S. K. Panday, P. Rimal, N. Ancona, and E. Alexov
Predicting the Effect of Single Mutations on Protein Stability and Binding with Respect to Types of Mutations
International Journal of Molecular Sciences, 24(15), 12073, 2023
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Computational Biophysics and Bioinformatics

Professor Emil Alexov Group

Journal Articles by P. Rimal