S. Pahari and E. Alexov. Modeling pKa without solute-water boundary: DelPhiPKa and its applications to protein-protein binding. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, volume 258, 2019.

A. Chakravorty, J. Higham, E. Alexov, and R. Henchman. Effect of water on the entropy of protein-protein binding. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, volume 258, 2019.

S. K. Panday, M. H. Shashikala, A. Chakravorty, S. Zhao, and E. Alexov. Reproducing ensemble averaged electrostatics with Super-Gaussian-based smooth dielectric function: application to electrostatic component of binding energy of protein complexes. Communications in Information and Systems, volume 19, issue 4, 2019.

S. R. Ganakammal and E. Alexov. Evaluation of performance of leading algorithms for variant pathogenicity predictions and designing a combinatory predictor method: Application to Rett syndrome variants. PeerJ, PeerJ Inc., volume 7, pages e8106, 2019.

S. K. Panday, M. H. Shashikala, M. Koirala, S. Pahari, A. Chakvorty, Y. Peng, L. Li, Z. Jia, C. Li, and E. Alexov. Modeling electrostatics in molecular biology: A tutorial of DelPhi and associated resources [Article v1. 0]. Living Journal of Computational Molecular Science, University of Colorado Boulder, volume 1, issue 2, pages 10841, 2019.

B. Wu, Y. Peng, J. Eggert, and E. Alexov. Novel Genetic Markers for Early Detection of Elevated Breast Cancer Risk in Women. International journal of molecular sciences, Multidisciplinary Digital Publishing Institute, volume 20, issue 19, pages 4828, 2019.

H. Shashikala, A. Chakravorty, and E. Alexov. Modeling electrostatic force in protein-protein recognition. Frontiers in molecular biosciences, Frontiers, volume 6, pages 94, 2019.

Y. Peng, Y. Yang, L. Li, Z. Jia, W. Cao, and E. Alexov. DFMD: fast and effective DelPhiForce steered molecular dynamics approach to model ligand approach toward a receptor: Application to spermine synthase enzyme. Frontiers in molecular biosciences, Frontiers, volume 6, pages 74, 2019.

C. Li, Z. Jia, A. Chakravorty, S. Pahari, Y. Peng, S. Basu, M. Koirala, S. K. Panday, M. Petukh, L. Li, and others. DelPhi suite: New developments and review of functionalities. Journal of computational chemistry, John Wiley \& Sons, Inc. Hoboken, USA, volume 40, issue 28, pages 2502-2508, 2019.

N. Tajielyato and E. Alexov. Modeling pKas of unfolded proteins to probe structural models of unfolded state. Journal of Theoretical and Computational Chemistry, World Scientific Publishing Company, volume 18, issue 4, pages 1950020, 2019.

T. Hazra, S. A. Ullah, S. Wang, E. Alexov, and S. Zhao. A super-Gaussian Poisson--Boltzmann model for electrostatic free energy calculation: smooth dielectric distribution for protein cavities and in both water and vacuum states. Journal of mathematical biology, Springer Berlin Heidelberg, volume 79, issue 2, pages 631-672, 2019.

C. J. Spellicy, Y. Peng, L. Olewiler, S. S. Cathey, R. C. Rogers, D. Bartholomew, J. Johnson, E. Alexov, J. A. Lee, M. J. Friez, and others. Three additional patients with EED-associated overgrowth: potential mutation hotspots identified? Journal of human genetics, Nature Publishing Group, volume 64, issue 6, pages 561-572, 2019.

N. Tajielyato and E. Alexov. Processivity vs. beating: Comparing cytoplasmic and axonemal dynein microtubule binding domain association with microtubule. International journal of molecular sciences, Multidisciplinary Digital Publishing Institute, volume 20, issue 5, pages 1090, 2019.

S. Pahari, L. Sun, and E. Alexov. PKAD: a database of experimentally measured pKa values of ionizable groups in proteins. Database, Oxford Academic, volume 2019, 2019.

M. S. H. Bosthanthirige, A. Chakravorty, and E. Alexov. Modeling Electrostatic Force in Protein-Protein Recognition. Biophysical Journal, Elsevier, volume 116, issue 3, pages 46a, 2019.

A. Chakravorty, J. Higham, E. Alexov, and R. H. Henchman. New method to determine the effect of dimerization on protein flexibility from molecular dynamics simulation using structural hierarchy. Biophysical Journal, Elsevier, volume 116, issue 3, pages 561a-562a, 2019.

N. Tajielyato, J. Alper, and E. Alexov. Comparative Study of Flagellar and Cytoplasmic Dyneins. Biophysical Journal, Elsevier, volume 116, issue 3, pages 560a, 2019.

S. Pahari, L. Sun, and E. Alexov. Surface-Free Protocol for Computing PKA's (DelPhiPKa): Applications to Protein-Protein Interactions. Biophysical Journal, Elsevier, volume 116, issue 3, pages 166a, 2019.

B. Wu, Y. Peng, J. A. Eggert, and E. Alexov. Investigating the Effects of Missense Mutations in MSH2 Gene Associated with Lynch Syndrome. Biophysical Journal, Elsevier, volume 116, issue 3, pages 192a, 2019.

Y. Peng, M. Koirala, and E. Alexov. Electrostatic Force Driven Molecular Dynamics Simulations. Biophysical Journal, Elsevier, volume 116, issue 3, pages 290a, 2019.

A. Chakravorty, E. Gallicchio, and E. Alexov. A grid-based algorithm in conjunction with a gaussian-based model of atoms for describing molecular geometry. Journal of computational chemistry, John Wiley \& Sons, Inc. Hoboken, USA, volume 40, issue 12, pages 1290-1304, 2019.

Y. Peng, E. Alexov, and S. Basu. Structural perspective on revealing and altering molecular functions of genetic variants linked with diseases. International journal of molecular sciences, Multidisciplinary Digital Publishing Institute, volume 20, issue 3, pages 548, 2019.