Computational Biophysics and Bioinformatics

E. Alexov and M. Gunner
Modeling the First Electron Transfer from QA to QB
Molecular Bioenergetics: Simulations of Electron, Proton, and Energy Transfer, 93, 2004
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E. Alexov and M. Gunner
Modeling the First Electron Transfer from QA to QB in Reaction Center Proteins from Rb. sphaeroides
2004
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C. L. Tang, D. Petrey, M. Fasnacht, M. Kosloff, E. Alexov, and B. Honig
Use of limited suboptimal alignment in homology modeling
Poster presented at 8th Annual International Conference on Research in Computational Molecular Biology (RECOMB), 2004
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A. Shosheva, A. Donchev, M. Dimitrov, I. Zlatanov, G. Toromanov, V. Getov, and E. Alexov
Experimental and numerical study of the poplar plastocyanin isoforms using Tyr as a probe for electrostatic similarity and dissimilarity
Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics, 1698(1), 67-75, 2004
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E. Alexov
Calculating proton uptake/release and binding free energy taking into account ionization and conformation changes induced by protein--inhibitor association: application to plasmepsin, cathepsin D and endothiapepsin--pepstatin complexes
Proteins: Structure, Function, and Bioinformatics, 56(3), 572-584, 2004
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E. Alexov
Numerical calculations of the pH of maximal protein stability: The effect of the sequence composition and three-dimensional structure
European Journal of Biochemistry, 271(1), 173-185, 2004
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Computational Biophysics and Bioinformatics

Professor Emil Alexov Group

2004